Package beagleutil
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Interface Summary Interface Description IntInterval InterfaceIntInterval
represents an interval of consecutive integers. -
Class Summary Class Description ChromIds ClassChromIds
is a singleton class that represents a list of chromosome identifiers.ChromInterval ClassChromInterval
represents a chromosome interval whose end points are genome coordinates.SampleIds ClassSampleIds
is a singleton class that represents a list of sample identifiers.Samples ClassSamples
stores a list of samples.ThreadSafeIndexer<T> ClassThreadSafeIndexer
indexes objects. -
Enum Summary Enum Description Phase ClassPhase
represents the equivalence of two phased genotypes for a marker or for a set of markers.