uk.ac.cam.ch.wwmm.opsin
Class SMILESFragmentBuilderTest
java.lang.Object
uk.ac.cam.ch.wwmm.opsin.SMILESFragmentBuilderTest
public class SMILESFragmentBuilderTest
- extends java.lang.Object
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
SMILESFragmentBuilderTest
public SMILESFragmentBuilderTest()
setUp
public void setUp()
testBuild
public void testBuild()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple1
public void testSimple1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple2
public void testSimple2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple3
public void testSimple3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple4
public void testSimple4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple5
public void testSimple5()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple6
public void testSimple6()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple7
public void testSimple7()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple8
public void testSimple8()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple9
public void testSimple9()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple10
public void testSimple10()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testSimple11
public void testSimple11()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
unterminatedRingOpening
public void unterminatedRingOpening()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
doublePositiveCharge1
public void doublePositiveCharge1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
doublePositiveCharge2
public void doublePositiveCharge2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
doubleNegativeCharge1
public void doubleNegativeCharge1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
doubleNegativeCharge2
public void doubleNegativeCharge2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
noIsotopeSpecified
public void noIsotopeSpecified()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
isotopeSpecified
public void isotopeSpecified()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE1
public void badlyFormedSMILE1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE2
public void badlyFormedSMILE2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE3
public void badlyFormedSMILE3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE4
public void badlyFormedSMILE4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE5
public void badlyFormedSMILE5()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE6
public void badlyFormedSMILE6()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE7
public void badlyFormedSMILE7()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
badlyFormedSMILE8
public void badlyFormedSMILE8()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
ringClosureHandling1
public void ringClosureHandling1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
ringClosureHandling2
public void ringClosureHandling2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
ringClosureHandling3
public void ringClosureHandling3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
ringClosureHandling4
public void ringClosureHandling4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
ringSupportGreaterThan10
public void ringSupportGreaterThan10()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling1
public void hydrogenHandling1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling2
public void hydrogenHandling2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling3
public void hydrogenHandling3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling4
public void hydrogenHandling4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling5
public void hydrogenHandling5()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling6
public void hydrogenHandling6()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling7
public void hydrogenHandling7()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling8
public void hydrogenHandling8()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling9
public void hydrogenHandling9()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling10
public void hydrogenHandling10()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling11
public void hydrogenHandling11()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling12
public void hydrogenHandling12()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling13
public void hydrogenHandling13()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling14
public void hydrogenHandling14()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling15
public void hydrogenHandling15()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling16
public void hydrogenHandling16()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling17
public void hydrogenHandling17()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling18
public void hydrogenHandling18()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling19
public void hydrogenHandling19()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling20
public void hydrogenHandling20()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
hydrogenHandling21
public void hydrogenHandling21()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
indicatedHydrogen1
public void indicatedHydrogen1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
indicatedHydrogen2
public void indicatedHydrogen2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest1
public void chiralityTest1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest2
public void chiralityTest2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest3
public void chiralityTest3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest4
public void chiralityTest4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest5
public void chiralityTest5()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest6
public void chiralityTest6()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest7
public void chiralityTest7()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
chiralityTest8
public void chiralityTest8()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo1
public void testDoubleBondStereo1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo2
public void testDoubleBondStereo2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo3
public void testDoubleBondStereo3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo4
public void testDoubleBondStereo4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo5a
public void testDoubleBondStereo5a()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo5b
public void testDoubleBondStereo5b()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondStereo6
public void testDoubleBondStereo6()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondMultiStereo1
public void testDoubleBondMultiStereo1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondMultiStereo2
public void testDoubleBondMultiStereo2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondMultiStereo3
public void testDoubleBondMultiStereo3()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondMultiStereo4
public void testDoubleBondMultiStereo4()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoela
public void testDoubleBondNoela()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelb
public void testDoubleBondNoelb()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelc
public void testDoubleBondNoelc()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoeld
public void testDoubleBondNoeld()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoele
public void testDoubleBondNoele()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelf
public void testDoubleBondNoelf()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelg
public void testDoubleBondNoelg()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelLike1
public void testDoubleBondNoelLike1()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
testDoubleBondNoelLike2
public void testDoubleBondNoelLike2()
throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
- Throws:
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException